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The last 5 uploaded publications
Genomic analysis of local variation and recent evolution in Plasmodium vivax
Richard D. Pearson, Roberto Amato, Sarah Auburn, Olivo Miotto, Jacob Almagro‐Garcia, Chanaki Amaratunga, Seila Suon, Sivanna Mao, Rintis Noviyanti, Hidayat Trimarsanto, Jutta Marfurt, Nicholas M. Anstey, Timothy William, Maciej F. Boni, Christiane Dolecek, Hien Tinh Tran, Sir Nicholas White, P Michon, Peter Siba, Livingstone Tavul, Gabrielle Harrison, Alyssa E. Barry, Ivo Müeller, Marcelo U. Ferreira, Nadira D. Karunaweera, Milijaona Randrianarivelojosia, Qi Gao, Christina Hubbart, Lee Hart, Ben Jeffery, Eleanor Drury, Daniel G. Mead, Mihir Kekre, Susana Campino, Magnus Manske, Victoria Cornelius, Bronwyn MacInnis, Kirk A. Rockett, Alistair Miles, Julian C. Rayner, Rick M. Fairhurst, François Nosten, Ric N. Price, Dominic Kwiatkowski (2016). Genomic analysis of local variation and recent evolution in Plasmodium vivax. Nature Genetics, 48(8), pp. 959-964, DOI: 10.1038/ng.3599.
Article144 days agoLineage-informative microhaplotypes for recurrence classification and spatio-temporal surveillance of Plasmodium vivax malaria parasites
Sasha V. Siegel, Hidayat Trimarsanto, Roberto Amato, Kathryn Murie, Aimee R. Taylor, Edwin Sutanto, Mariana Kleinecke, Georgia Whitton, James A Watson, Mallika Imwong, Ashenafi Assefa, Ghulam Rahim Awab, Hoang Chau Nguyen, Tinh Hien Tran, Justin A. Green, Gavin Koh, Sir Nicholas White, Nicholas Day, Dominic Kwiatkowski, Julian C. Rayner, Ric N. Price, Sarah Auburn (2024). Lineage-informative microhaplotypes for recurrence classification and spatio-temporal surveillance of Plasmodium vivax malaria parasites. Nature Communications, 15(1), DOI: 10.1038/s41467-024-51015-3.
Article144 days agoAn open dataset of Plasmodium vivax genome variation in 1,895 worldwide samples
Ishag Adam, Mohammad Shafiul Alam, Sisay Getachew Alemu, Chanaki Amaratunga, Roberto Amato, Voahangy Andrianaranjaka, Nicholas M. Anstey, Abraham Aseffa, Elizabeth A. Ashley, Ashenafi Assefa, Sarah Auburn, Bridget E. Barber, Alyssa E. Barry, Dhélio B. Pereira, Jun Cao, Nguyen Hoang Chau, Kesinee Chotivanich, Cindy S. Chu, Arjen M. Dondorp, Eleanor Drury, Diego F. Echeverry, Berhanu Erko, Fe Esperanza Espino, Rick M. Fairhurst, Abdul Faiz, María Fernanda Villegas, Qi Gao, Lemu Golassa, Sónia Gonçalves, Matthew J. Grigg, Yaghoob Hamedi, Tran Tinh Hien, Ye Htut, Kimberly J. Johnson, Nadira D. Karunaweera, Wasif Ali Khan, Srivicha Krudsood, Dominic Kwiatkowski, Marcus Lacerda, Benedikt Ley, Pharath Lim, Yaobao Liu, Alejandro Llanos‐Cuentas, Chanthap Lon, Tatiana M. Lopera-Mesa, Jutta Marfurt, P Michon, Olivo Miotto, Rezika Mohammed, Ivo Müeller, Chayadol Namaik-larp, Paul N. Newton, Thuy-Nhien Nguyen, François Nosten, Rintis Noviyanti, Zuleima Pava, Richard D. Pearson, Beyene Petros, Aung Pyae Phyo, Ric N. Price, Sasithon Pukrittayakamee, Ghulam Rahim Awab, Milijaona Randrianarivelojosia, Julian C. Rayner, Angela Rumaseb, Sasha V. Siegel, Victoria J. Simpson, Kamala Thriemer, Alberto Tobón-Castaño, Hidayat Trimarsanto, Marcelo U. Ferreira, Iván Darío Vélez, Sonam Wangchuk, Thomas E. Wellems, Sir Nicholas White, Timothy William, María Fernanda Yasnot, Daniel Yilma (2022). An open dataset of Plasmodium vivax genome variation in 1,895 worldwide samples. Wellcome Open Research, 7, pp. 136-136, DOI: 10.12688/wellcomeopenres.17795.1.
Preprint144 days agoA molecular barcode and web-based data analysis tool to identify imported Plasmodium vivax malaria
Hidayat Trimarsanto, Roberto Amato, Richard D. Pearson, Edwin Sutanto, Rintis Noviyanti, Leily Trianty, Jutta Marfurt, Zuleima Pava, Diego F. Echeverry, Tatiana M. Lopera-Mesa, Lidia Madeline Montenegro, Alberto Tobón-Castaño, Matthew J. Grigg, Bridget E. Barber, Timothy William, Nicholas M. Anstey, Sisay Getachew, Beyene Petros, Abraham Aseffa, Ashenafi Assefa, Ghulam Rahim Awab, Nguyen Hoang Chau, Tran Tinh Hien, Mohammad Shafiul Alam, Wasif Ali Khan, Benedikt Ley, Kamala Thriemer, Sonam Wangchuck, Yaghoob Hamedi, Ishag Adam, Yaobao Liu, Qi Gao, Kanlaya Sriprawat, Marcelo U. Ferreira, Moses Laman, Alyssa E. Barry, Ivo Müeller, Marcus Lacerda, Alejandro Llanos‐Cuentas, Srivicha Krudsood, Chanthap Lon, Rezika Mohammed, Daniel Yilma, Dhélio B. Pereira, Fe Esperanza Espino, Cindy S. Chu, Iván Darío Vélez, Chayadol Namaik-larp, María Fernanda Villegas, Justin A. Green, Gavin Koh, Julian C. Rayner, Eleanor Drury, Sónia Gonçalves, Victoria J. Simpson, Olivo Miotto, Alistair Miles, Sir Nicholas White, François Nosten, Dominic Kwiatkowski, Ric N. Price, Sarah Auburn (2022). A molecular barcode and web-based data analysis tool to identify imported Plasmodium vivax malaria. Communications Biology, 5(1), DOI: 10.1038/s42003-022-04352-2.
Article144 days agoLineage-informative microhaplotypes for spatio-temporal surveillance of<i>Plasmodium vivax</i>malaria parasites
Sasha V. Siegel, Roberto Amato, Hidayat Trimarsanto, Edwin Sutanto, Mariana Kleinecke, Kathryn Murie, Georgia Whitton, Aimee R. Taylor, James A Watson, Mallika Imwong, Ashenafi Assefa, Ghulam Rahim Awab, Nguyen Hoang Chau, Tran Tinh Hien, Justin A. Green, Gavin Koh, Sir Nicholas White, Nicholas Day, Dominic Kwiatkowski, Julian C. Rayner, Ric N. Price, Sarah Auburn (2023). Lineage-informative microhaplotypes for spatio-temporal surveillance of<i>Plasmodium vivax</i>malaria parasites. medRxiv (Cold Spring Harbor Laboratory), DOI: 10.1101/2023.03.13.23287179.
Preprint144 days ago