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The last 5 uploaded publications
Maximizing microbial bioproduction from sustainable carbon sources using iterative systems engineering
Thomas Eng, Deepanwita Banerjee, Javier Menasalvas, Yan Chen, Jennifer Gin, Hemant Choudhary, Edward E. K. Baidoo, Jian-Hua Chen, Axel Ekman, Ramu Kakumanu, Yuzhong Liu, Alex Codik, Carolyn A. Larabell, John M. Gladden, Blake A. Simmons, Jay D Keasling, Christopher J. Petzold, Aindrila Mukhopadhyay (2023). Maximizing microbial bioproduction from sustainable carbon sources using iterative systems engineering. , 42(9), DOI: https://doi.org/10.1016/j.celrep.2023.113087.
Article123 days agoEnsemble and Iterative Engineering for Maximized Bioconversion to the Blue Pigment, Indigoidine from Non-Canonical Sustainable Carbon Sources
Thomas Eng, Deepanwita Banerjee, Javier Menasalvas, Yan Chen, Jennifer Gin, Hemant Choudhary, Edward E. K. Baidoo, Jian-Hua Chen, Axel Ekman, Ramu Kakumanu, Yuzhong Liu, Alex Codik, Carolyn A. Larabell, John M. Gladden, Blake A. Simmons, Jay D Keasling, Christopher J. Petzold, Aindrila Mukhopadhyay (2023). Ensemble and Iterative Engineering for Maximized Bioconversion to the Blue Pigment, Indigoidine from Non-Canonical Sustainable Carbon Sources. , DOI: https://doi.org/10.1101/2023.03.16.532821.
Preprint123 days agoInvestigation of Bar-seq as a method to study population dynamics of Saccharomyces cerevisiae deletion library during bioreactor cultivation
Maren Wehrs, Mitchell G. Thompson, Deepanwita Banerjee, Jan‐Philip Prahl, Norma M. Morella, Carolina A. Barcelos, Jadie Moon, Zak Costello, Jay D Keasling, Patrick M. Shih, Deepti Tanjore, Aindrila Mukhopadhyay (2020). Investigation of Bar-seq as a method to study population dynamics of Saccharomyces cerevisiae deletion library during bioreactor cultivation. , 19(1), DOI: https://doi.org/10.1186/s12934-020-01423-z.
Article123 days agoGenome-scale metabolic rewiring to achieve predictable titers rates and yield of a non-native product at scale
Deepanwita Banerjee, Thomas Eng, Andrew K. Lau, Brenda Wang, Yusuke Sasaki, Robin A. Herbert, Yan Chen, Yuzhong Liu, Jan‐Philip Prahl, Vasanth Singan, Deepti Tanjore, Christopher J. Petzold, Jay D Keasling, Aindrila Mukhopadhyay (2020). Genome-scale metabolic rewiring to achieve predictable titers rates and yield of a non-native product at scale. , DOI: https://doi.org/10.1101/2020.02.21.954792.
Preprint123 days agoPopulation dynamics analysis of <i>Saccharomyces cerevisiae</i> deletion library during fed-batch cultivation using Bar-seq
Maren Wehrs, Mitchell G. Thompson, Deepanwita Banerjee, Jan‐Philip Prahl, Carolina A. Barcelos, Jadie Moon, Norma M. Morella, Zak Costello, Jay D Keasling, Patrick M. Shih, Deepti Tanjore, Aindrila Mukhopadhyay (2020). Population dynamics analysis of <i>Saccharomyces cerevisiae</i> deletion library during fed-batch cultivation using Bar-seq. , DOI: https://doi.org/10.1101/2020.04.27.064675.
Preprint123 days ago